WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56A3.1.1 Sequence Name  C56A3.1.1
Length (nt)  1342   Chromosome Location  V: 13561973-13563941
Chromosome . Primary Identifier  V Chromosome Location . Start  13561973
Chromosome Location . End  13563941 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56A3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001726 grl-17 C56A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56A3.1 C56A3.1 1182   V: 13562105-13562293

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.1.1 13561973 13563941 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204835   321   V: 13561973-13562293 Caenorhabditis elegans
Exon204836   632   V: 13562338-13562969 Caenorhabditis elegans
Exon204838   90   V: 13563021-13563110 Caenorhabditis elegans
Exon204840   118   V: 13563303-13563420 Caenorhabditis elegans
Exon204842   181   V: 13563761-13563941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.1.1 13561973 13563941 -1

1 Sequence

Length
1342

1 Sequence Ontology Term

Identifier Name Description
transcript