WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F4.7.1 Sequence Name  F53F4.7.1
Length (nt)  1111   Chromosome Location  V: 13612414-13613970
Chromosome . Primary Identifier  V Chromosome Location . Start  13612414
Chromosome Location . End  13613970 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009990 F53F4.7 F53F4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F4.7 F53F4.7 1083   V: 13612439-13612769

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F4.7.1 13612414 13613970 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204956   356   V: 13612414-13612769 Caenorhabditis elegans
Exon204957   168   V: 13612897-13613064 Caenorhabditis elegans
Exon204958   215   V: 13613119-13613333 Caenorhabditis elegans
Exon204959   372   V: 13613599-13613970 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F4.7.1 13612414 13613970 -1

1 Sequence

Length
1111

1 Sequence Ontology Term

Identifier Name Description
transcript