WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53F4.9a Sequence Name  F53F4.9a
Length (nt)  1014   Chromosome Location  V: 13617851-13617968
Chromosome . Primary Identifier  V Chromosome Location . Start  13617851
Chromosome Location . End  13617968
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F4.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24998 SRD-11, isoform a 38.8 337 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048159
WBRNAi00015531
WBRNAi00103381

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53F4.9a 13617851 13617968 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005089 srd-11 F53F4.9 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53F4.9a 13617851 13617968 -1
CDS:F53F4.9a 13618011 13618201 -1
CDS:F53F4.9a 13618655 13618927 -1
CDS:F53F4.9a 13618972 13619125 -1
CDS:F53F4.9a 13619175 13619341 -1
CDS:F53F4.9a 13619576 13619686 -1

1 Sequence

Length
1014

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53F4.9a.1 F53F4.9a.1 1314   V: 13617717-13619852