WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F4.12.1 Sequence Name  F53F4.12.1
Length (nt)  1248   Chromosome Location  V: 13626047-13627487
Chromosome . Primary Identifier  V Chromosome Location . Start  13626047
Chromosome Location . End  13627487 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F4.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009994 F53F4.12 F53F4.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F4.12 F53F4.12 975   V: 13626047-13626172

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F4.12.1 13626047 13627487 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204989   126   V: 13626047-13626172 Caenorhabditis elegans
Exon204990   219   V: 13626221-13626439 Caenorhabditis elegans
Exon204991   445   V: 13626487-13626931 Caenorhabditis elegans
Exon204992   458   V: 13627030-13627487 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F4.12.1 13626047 13627487 1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
transcript