WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G11.1a.1 Sequence Name  F58G11.1a.1
Length (nt)  2663   Chromosome Location  V: 13661261-13664233
Chromosome . Primary Identifier  V Chromosome Location . Start  13661261
Chromosome Location . End  13664233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010279 letm-1 F58G11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G11.1a F58G11.1a 2355   V: 13661291-13661421

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.1a.1 13661261 13664233 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205027   161   V: 13661261-13661421 Caenorhabditis elegans
Exon205028   421   V: 13661481-13661901 Caenorhabditis elegans
Exon205030   527   V: 13661950-13662476 Caenorhabditis elegans
Exon205032   1045   V: 13662528-13663572 Caenorhabditis elegans
Exon205035   147   V: 13663622-13663768 Caenorhabditis elegans
Exon205036   362   V: 13663872-13664233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.1a.1 13661261 13664233 1

1 Sequence

Length
2663

1 Sequence Ontology Term

Identifier Name Description
transcript