WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F58G11.1b Sequence Name  F58G11.1b
Length (nt)  2313   Chromosome Location  V: 13661291-13661421
Chromosome . Primary Identifier  V Chromosome Location . Start  13661291
Chromosome Location . End  13661421
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G11.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20894 LETM-1, isoform b 87.3 770 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00049042
WBRNAi00016006
WBRNAi00071831
WBRNAi00066321
WBRNAi00071590
WBRNAi00109987
WBRNAi00111808
WBRNAi00066322
WBRNAi00033128
WBRNAi00075622
WBRNAi00075621
WBRNAi00075623
WBRNAi00075624
WBRNAi00110219
WBRNAi00089366
WBRNAi00089350
WBRNAi00109143
WBRNAi00109913
WBRNAi00109946
WBRNAi00109979
WBRNAi00110221

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F58G11.1b 13661291 13661421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010279 letm-1 F58G11.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F58G11.1b 13661291 13661421 1
CDS:F58G11.1b 13661481 13661901 1
CDS:F58G11.1b 13661950 13662476 1
CDS:F58G11.1b 13662528 13663572 1
CDS:F58G11.1b 13663622 13663726 1
CDS:F58G11.1b 13663872 13663955 1

1 Sequence

Length
2313

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F58G11.1b.1 F58G11.1b.1 2625   V: 13661257-13664233