WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199075 Gene Name  H37A05.5
Sequence Name  ? H37A05.5 Organism  Caenorhabditis elegans
Automated Description  Is affected by nhr-86 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 70
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199075

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H37A05.5 H37A05.5 70   V: 13645973-13646042
 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
gk963271
gk963706
gk963301
gk964458
gk964459
gk964026
WBVar02124253
otn4438

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199075 13645973 13646042 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_13634250..13645972   11723 V: 13634250-13645972 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Promoters regions that bind with NHR-86 according to ChIP-Seq using NHR-86-GFP protein. N.A. WBPaper00056073:NHR-86_interacting_promoter

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199075 13645973 13646042 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
70

1 Sequence Ontology Term