WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G11.2a.1 Sequence Name  F58G11.2a.1
Length (nt)  3283   Chromosome Location  V: 13665389-13669290
Chromosome . Primary Identifier  V Chromosome Location . Start  13665389
Chromosome Location . End  13669290 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010280 rde-12 F58G11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G11.2a F58G11.2a 2880   V: 13665401-13665635

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.2a.1 13665389 13669290 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205038   247   V: 13665389-13665635 Caenorhabditis elegans
Exon205041   345   V: 13665687-13666031 Caenorhabditis elegans
Exon205044   1341   V: 13666079-13667419 Caenorhabditis elegans
Exon205047   109   V: 13667507-13667615 Caenorhabditis elegans
Exon205050   353   V: 13667928-13668280 Caenorhabditis elegans
Exon205053   468   V: 13668350-13668817 Caenorhabditis elegans
Exon205057   420   V: 13668871-13669290 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.2a.1 13665389 13669290 1

1 Sequence

Length
3283

1 Sequence Ontology Term

Identifier Name Description
transcript