WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G11.5.1 Sequence Name  F58G11.5.1
Length (nt)  2126   Chromosome Location  V: 13676022-13678587
Chromosome . Primary Identifier  V Chromosome Location . Start  13676022
Chromosome Location . End  13678587 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006442 tag-65 F58G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G11.5 F58G11.5 2028   V: 13676115-13676261

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.5.1 13676022 13678587 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205087   240   V: 13676022-13676261 Caenorhabditis elegans
Exon205088   112   V: 13676311-13676422 Caenorhabditis elegans
Exon205089   483   V: 13676472-13676954 Caenorhabditis elegans
Exon205090   125   V: 13677004-13677128 Caenorhabditis elegans
Exon205091   275   V: 13677178-13677452 Caenorhabditis elegans
Exon205092   353   V: 13677502-13677854 Caenorhabditis elegans
Exon205093   152   V: 13677902-13678053 Caenorhabditis elegans
Exon205094   141   V: 13678104-13678244 Caenorhabditis elegans
Exon205095   140   V: 13678288-13678427 Caenorhabditis elegans
Exon205096   105   V: 13678483-13678587 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.5.1 13676022 13678587 -1

1 Sequence

Length
2126

1 Sequence Ontology Term

Identifier Name Description
transcript