WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G11.5.1 Sequence Name  F58G11.5.1
Length (nt)  2126   Chromosome Location  V: 13676022-13678587
Chromosome . Primary Identifier  V Chromosome Location . Start  13676022
Chromosome Location . End  13678587 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006442 tag-65 F58G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G11.5 F58G11.5 2028   V: 13676115-13676261

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.5.1 13676022 13678587 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205141   240   V: 13676022-13676261 Caenorhabditis elegans
Exon205142   112   V: 13676311-13676422 Caenorhabditis elegans
Exon205143   483   V: 13676472-13676954 Caenorhabditis elegans
Exon205144   125   V: 13677004-13677128 Caenorhabditis elegans
Exon205145   275   V: 13677178-13677452 Caenorhabditis elegans
Exon205146   353   V: 13677502-13677854 Caenorhabditis elegans
Exon205147   152   V: 13677902-13678053 Caenorhabditis elegans
Exon205148   141   V: 13678104-13678244 Caenorhabditis elegans
Exon205149   140   V: 13678288-13678427 Caenorhabditis elegans
Exon205150   105   V: 13678483-13678587 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G11.5.1 13676022 13678587 -1

1 Sequence

Length
2126

1 Sequence Ontology Term

Identifier Name Description
transcript