WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D3.3a.1 Sequence Name  T01D3.3a.1
Length (nt)  3701   Chromosome Location  V: 13704271-13711091
Chromosome . Primary Identifier  V Chromosome Location . Start  13704271
Chromosome Location . End  13711091 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011328 T01D3.3 T01D3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D3.3a T01D3.3a 2409   V: 13705435-13705654

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D3.3a.1 13704271 13711091 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205139   1384   V: 13704271-13705654 Caenorhabditis elegans
Exon205152   141   V: 13708256-13708396 Caenorhabditis elegans
Exon205155   238   V: 13708443-13708680 Caenorhabditis elegans
Exon205158   878   V: 13708853-13709730 Caenorhabditis elegans
Exon205161   542   V: 13709808-13710349 Caenorhabditis elegans
Exon205164   296   V: 13710526-13710821 Caenorhabditis elegans
Exon205169   222   V: 13710870-13711091 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D3.3a.1 13704271 13711091 1

1 Sequence

Length
3701

1 Sequence Ontology Term

Identifier Name Description
transcript