WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D3.3b.1 Sequence Name  T01D3.3b.1
Length (nt)  3227   Chromosome Location  V: 13705029-13711089
Chromosome . Primary Identifier  V Chromosome Location . Start  13705029
Chromosome Location . End  13711089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011328 T01D3.3 T01D3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D3.3b T01D3.3b 3036   V: 13705094-13705160

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D3.3b.1 13705029 13711089 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205141   132   V: 13705029-13705160 Caenorhabditis elegans
Exon205142   156   V: 13705499-13705654 Caenorhabditis elegans
Exon205144   156   V: 13705743-13705898 Caenorhabditis elegans
Exon205149   106   V: 13707542-13707647 Caenorhabditis elegans
Exon205150   169   V: 13707798-13707966 Caenorhabditis elegans
Exon205151   193   V: 13708013-13708205 Caenorhabditis elegans
Exon205153   141   V: 13708256-13708396 Caenorhabditis elegans
Exon205156   238   V: 13708443-13708680 Caenorhabditis elegans
Exon205159   878   V: 13708853-13709730 Caenorhabditis elegans
Exon205162   542   V: 13709808-13710349 Caenorhabditis elegans
Exon205165   296   V: 13710526-13710821 Caenorhabditis elegans
Exon205168   220   V: 13710870-13711089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D3.3b.1 13705029 13711089 1

1 Sequence

Length
3227

1 Sequence Ontology Term

Identifier Name Description
transcript