WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35E12.7c.1 Sequence Name  F35E12.7c.1
Length (nt)  1677   Chromosome Location  V: 13727761-13730784
Chromosome . Primary Identifier  V Chromosome Location . Start  13727761
Chromosome Location . End  13730784 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35E12.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009431 dct-17 F35E12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35E12.7c F35E12.7c 1614   V: 13727813-13727920

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35E12.7c.1 13727761 13730784 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205228   160   V: 13727761-13727920 Caenorhabditis elegans
Exon205234   60   V: 13728592-13728651 Caenorhabditis elegans
Exon205237   163   V: 13728700-13728862 Caenorhabditis elegans
Exon205241   327   V: 13728912-13729238 Caenorhabditis elegans
Exon205245   71   V: 13729287-13729357 Caenorhabditis elegans
Exon205249   167   V: 13729403-13729569 Caenorhabditis elegans
Exon205253   226   V: 13729616-13729841 Caenorhabditis elegans
Exon205257   101   V: 13729899-13729999 Caenorhabditis elegans
Exon205261   116   V: 13730150-13730265 Caenorhabditis elegans
Exon205265   92   V: 13730321-13730412 Caenorhabditis elegans
Exon205269   107   V: 13730458-13730564 Caenorhabditis elegans
Exon205273   87   V: 13730698-13730784 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35E12.7c.1 13727761 13730784 -1

1 Sequence

Length
1677

1 Sequence Ontology Term

Identifier Name Description
transcript