WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35E12.7b.1 Sequence Name  F35E12.7b.1
Length (nt)  1614   Chromosome Location  V: 13727762-13730782
Chromosome . Primary Identifier  V Chromosome Location . Start  13727762
Chromosome Location . End  13730782 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35E12.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009431 dct-17 F35E12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35E12.7b F35E12.7b 1554   V: 13727813-13727920

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35E12.7b.1 13727762 13730782 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205229   159   V: 13727762-13727920 Caenorhabditis elegans
Exon205236   163   V: 13728700-13728862 Caenorhabditis elegans
Exon205240   327   V: 13728912-13729238 Caenorhabditis elegans
Exon205244   71   V: 13729287-13729357 Caenorhabditis elegans
Exon205248   167   V: 13729403-13729569 Caenorhabditis elegans
Exon205252   226   V: 13729616-13729841 Caenorhabditis elegans
Exon205256   101   V: 13729899-13729999 Caenorhabditis elegans
Exon205260   116   V: 13730150-13730265 Caenorhabditis elegans
Exon205264   92   V: 13730321-13730412 Caenorhabditis elegans
Exon205268   107   V: 13730458-13730564 Caenorhabditis elegans
Exon205272   85   V: 13730698-13730782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35E12.7b.1 13727762 13730782 -1

1 Sequence

Length
1614

1 Sequence Ontology Term

Identifier Name Description
transcript