WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35E12.7a.1 Sequence Name  F35E12.7a.1
Length (nt)  2266   Chromosome Location  V: 13727770-13730776
Chromosome . Primary Identifier  V Chromosome Location . Start  13727770
Chromosome Location . End  13730776 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35E12.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009431 dct-17 F35E12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35E12.7a F35E12.7a 2220   V: 13727813-13727920

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35E12.7a.1 13727770 13730776 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205285   151   V: 13727770-13727920 Caenorhabditis elegans
Exon205286   666   V: 13727986-13728651 Caenorhabditis elegans
Exon205289   163   V: 13728700-13728862 Caenorhabditis elegans
Exon205293   327   V: 13728912-13729238 Caenorhabditis elegans
Exon205297   71   V: 13729287-13729357 Caenorhabditis elegans
Exon205301   167   V: 13729403-13729569 Caenorhabditis elegans
Exon205305   226   V: 13729616-13729841 Caenorhabditis elegans
Exon205309   101   V: 13729899-13729999 Caenorhabditis elegans
Exon205313   116   V: 13730150-13730265 Caenorhabditis elegans
Exon205317   92   V: 13730321-13730412 Caenorhabditis elegans
Exon205321   107   V: 13730458-13730564 Caenorhabditis elegans
Exon205325   79   V: 13730698-13730776 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35E12.7a.1 13727770 13730776 -1

1 Sequence

Length
2266

1 Sequence Ontology Term

Identifier Name Description
transcript