WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53C11.3.1 Sequence Name  F53C11.3.1
Length (nt)  1107   Chromosome Location  V: 13782399-13784109
Chromosome . Primary Identifier  V Chromosome Location . Start  13782399
Chromosome Location . End  13784109 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53C11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009973 decr-1.1 F53C11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53C11.3 F53C11.3 942   V: 13782489-13782563

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53C11.3.1 13782399 13784109 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205430   165   V: 13782399-13782563 Caenorhabditis elegans
Exon205431   227   V: 13782610-13782836 Caenorhabditis elegans
Exon205432   493   V: 13783071-13783563 Caenorhabditis elegans
Exon205433   222   V: 13783888-13784109 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53C11.3.1 13782399 13784109 1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
transcript