WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53C11.5b.1 Sequence Name  F53C11.5b.1
Length (nt)  2941   Chromosome Location  V: 13789887-13796184
Chromosome . Primary Identifier  V Chromosome Location . Start  13789887
Chromosome Location . End  13796184 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53C11.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009975 F53C11.5 F53C11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53C11.5b F53C11.5b 2676   V: 13789887-13789961

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53C11.5b.1 13789887 13796184 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205457   75   V: 13789887-13789961 Caenorhabditis elegans
Exon205458   100   V: 13790060-13790159 Caenorhabditis elegans
Exon205460   234   V: 13791017-13791250 Caenorhabditis elegans
Exon205463   450   V: 13791833-13792282 Caenorhabditis elegans
Exon205466   78   V: 13792735-13792812 Caenorhabditis elegans
Exon205469   92   V: 13792859-13792950 Caenorhabditis elegans
Exon205472   229   V: 13792995-13793223 Caenorhabditis elegans
Exon205475   106   V: 13793447-13793552 Caenorhabditis elegans
Exon205478   546   V: 13793997-13794542 Caenorhabditis elegans
Exon205481   213   V: 13794974-13795186 Caenorhabditis elegans
Exon205484   369   V: 13795235-13795603 Caenorhabditis elegans
Exon205487   105   V: 13795652-13795756 Caenorhabditis elegans
Exon205489   344   V: 13795841-13796184 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53C11.5b.1 13789887 13796184 1

1 Sequence

Length
2941

1 Sequence Ontology Term

Identifier Name Description
transcript