WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53C11.5c.1 Sequence Name  F53C11.5c.1
Length (nt)  2815   Chromosome Location  V: 13791017-13796233
Chromosome . Primary Identifier  V Chromosome Location . Start  13791017
Chromosome Location . End  13796233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53C11.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009975 F53C11.5 F53C11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53C11.5c F53C11.5c 2493   V: 13791025-13791250

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53C11.5c.1 13791017 13796233 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205461   234   V: 13791017-13791250 Caenorhabditis elegans
Exon205464   450   V: 13791833-13792282 Caenorhabditis elegans
Exon205467   78   V: 13792735-13792812 Caenorhabditis elegans
Exon205470   92   V: 13792859-13792950 Caenorhabditis elegans
Exon205473   229   V: 13792995-13793223 Caenorhabditis elegans
Exon205476   106   V: 13793447-13793552 Caenorhabditis elegans
Exon205479   546   V: 13793997-13794542 Caenorhabditis elegans
Exon205482   213   V: 13794974-13795186 Caenorhabditis elegans
Exon205485   369   V: 13795235-13795603 Caenorhabditis elegans
Exon205488   105   V: 13795652-13795756 Caenorhabditis elegans
Exon205490   393   V: 13795841-13796233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53C11.5c.1 13791017 13796233 1

1 Sequence

Length
2815

1 Sequence Ontology Term

Identifier Name Description
transcript