WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55B12.2.1 Sequence Name  F55B12.2.1
Length (nt)  984   Chromosome Location  V: 13815374-13816977
Chromosome . Primary Identifier  V Chromosome Location . Start  13815374
Chromosome Location . End  13816977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55B12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010088 F55B12.2 F55B12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55B12.2 F55B12.2 984   V: 13815374-13815567

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55B12.2.1 13815374 13816977 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205533   194   V: 13815374-13815567 Caenorhabditis elegans
Exon205534   158   V: 13815613-13815770 Caenorhabditis elegans
Exon205535   138   V: 13815894-13816031 Caenorhabditis elegans
Exon205536   135   V: 13816078-13816212 Caenorhabditis elegans
Exon205537   143   V: 13816260-13816402 Caenorhabditis elegans
Exon205538   53   V: 13816448-13816500 Caenorhabditis elegans
Exon205539   95   V: 13816547-13816641 Caenorhabditis elegans
Exon205540   68   V: 13816910-13816977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55B12.2.1 13815374 13816977 -1

1 Sequence

Length
984

1 Sequence Ontology Term

Identifier Name Description
transcript