WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55B12.3a Sequence Name  F55B12.3a
Length (nt)  1764   Chromosome Location  V: 13819365-13819454
Chromosome . Primary Identifier  V Chromosome Location . Start  13819365
Chromosome Location . End  13819454
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55B12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25007 SEL-10, isoform a 65.3 587 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00089813
WBRNAi00068020
WBRNAi00000317
WBRNAi00048450
WBRNAi00048451
WBRNAi00015695
WBRNAi00092205
WBRNAi00076481
WBRNAi00027833
WBRNAi00062270
WBRNAi00092204
WBRNAi00092220
WBRNAi00081625
WBRNAi00089919
WBRNAi00090079
WBRNAi00090237

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55B12.3a 13819365 13819454 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004767 sel-10 F55B12.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55B12.3a 13819365 13819454 1
CDS:F55B12.3a 13819520 13819587 1
CDS:F55B12.3a 13819630 13819726 1
CDS:F55B12.3a 13819961 13820095 1
CDS:F55B12.3a 13820144 13820289 1
CDS:F55B12.3a 13820338 13820457 1
CDS:F55B12.3a 13820518 13820910 1
CDS:F55B12.3a 13821258 13821483 1
CDS:F55B12.3a 13821533 13821715 1
CDS:F55B12.3a 13822023 13822164 1
CDS:F55B12.3a 13822215 13822378 1

1 Sequence

Length
1764

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55B12.3a.1 F55B12.3a.1 2370   V: 13819361-13822980