WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55B12.3b.1 Sequence Name  F55B12.3b.1
Length (nt)  2361   Chromosome Location  V: 13819361-13822977
Chromosome . Primary Identifier  V Chromosome Location . Start  13819361
Chromosome Location . End  13822977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55B12.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004767 sel-10 F55B12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55B12.3b F55B12.3b 1758   V: 13819365-13819454

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55B12.3b.1 13819361 13822977 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205595   94   V: 13819361-13819454 Caenorhabditis elegans
Exon205599   68   V: 13819520-13819587 Caenorhabditis elegans
Exon205602   91   V: 13819636-13819726 Caenorhabditis elegans
Exon205605   135   V: 13819961-13820095 Caenorhabditis elegans
Exon205608   146   V: 13820144-13820289 Caenorhabditis elegans
Exon205611   120   V: 13820338-13820457 Caenorhabditis elegans
Exon205614   393   V: 13820518-13820910 Caenorhabditis elegans
Exon205617   226   V: 13821258-13821483 Caenorhabditis elegans
Exon205620   183   V: 13821533-13821715 Caenorhabditis elegans
Exon205623   142   V: 13822023-13822164 Caenorhabditis elegans
Exon205626   763   V: 13822215-13822977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55B12.3b.1 13819361 13822977 1

1 Sequence

Length
2361

1 Sequence Ontology Term

Identifier Name Description
transcript