WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55B12.5 Sequence Name  F55B12.5
Length (nt)  1656   Chromosome Location  V: 13828269-13828407
Chromosome . Primary Identifier  V Chromosome Location . Start  13828269
Chromosome Location . End  13828407
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55B12.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32438 NRF-5 60.8 551 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00113310
WBRNAi00048453
WBRNAi00015696
WBRNAi00032854
WBRNAi00072847
WBRNAi00072846
WBRNAi00113081
WBRNAi00072848
WBRNAi00113140

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55B12.5 13828269 13828407 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003812 nrf-5 F55B12.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55B12.5 13828269 13828407 1
CDS:F55B12.5 13828814 13829115 1
CDS:F55B12.5 13829162 13829254 1
CDS:F55B12.5 13829303 13829638 1
CDS:F55B12.5 13829831 13830018 1
CDS:F55B12.5 13830065 13830157 1
CDS:F55B12.5 13830200 13830329 1
CDS:F55B12.5 13830376 13830450 1
CDS:F55B12.5 13830526 13830825 1

1 Sequence

Length
1656

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55B12.5.1 F55B12.5.1 1740   V: 13828267-13830907