WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55B12.9.1 Sequence Name  F55B12.9.1
Length (nt)  1576   Chromosome Location  V: 13834251-13836629
Chromosome . Primary Identifier  V Chromosome Location . Start  13834251
Chromosome Location . End  13836629 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55B12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006020 srx-129 F55B12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55B12.9 F55B12.9 945   V: 13834876-13834920

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55B12.9.1 13834251 13836629 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205663   455   V: 13834251-13834705 Caenorhabditis elegans
Exon205665   173   V: 13834748-13834920 Caenorhabditis elegans
Exon205666   241   V: 13834968-13835208 Caenorhabditis elegans
Exon205668   153   V: 13835485-13835637 Caenorhabditis elegans
Exon205670   230   V: 13835791-13836020 Caenorhabditis elegans
Exon205672   131   V: 13836071-13836201 Caenorhabditis elegans
Exon205674   193   V: 13836437-13836629 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55B12.9.1 13834251 13836629 1

1 Sequence

Length
1576

1 Sequence Ontology Term

Identifier Name Description
transcript