WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09F3.12.1 Sequence Name  F09F3.12.1
Length (nt)  1019   Chromosome Location  V: 13857432-13859021
Chromosome . Primary Identifier  V Chromosome Location . Start  13857432
Chromosome Location . End  13859021 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09F3.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006027 srx-136 F09F3.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09F3.12 F09F3.12 924   V: 13857448-13857736

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09F3.12.1 13857432 13859021 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205719   305   V: 13857432-13857736 Caenorhabditis elegans
Exon205720   153   V: 13857788-13857940 Caenorhabditis elegans
Exon205721   164   V: 13858063-13858226 Caenorhabditis elegans
Exon205722   200   V: 13858274-13858473 Caenorhabditis elegans
Exon205723   197   V: 13858825-13859021 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09F3.12.1 13857432 13859021 1

1 Sequence

Length
1019

1 Sequence Ontology Term

Identifier Name Description
transcript