WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09F3.11.1 Sequence Name  F09F3.11.1
Length (nt)  1103   Chromosome Location  V: 13859206-13861402
Chromosome . Primary Identifier  V Chromosome Location . Start  13859206
Chromosome Location . End  13861402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09F3.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006026 srx-135 F09F3.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09F3.11 F09F3.11 927   V: 13859301-13859345

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09F3.11.1 13859206 13861402 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205724   140   V: 13859206-13859345 Caenorhabditis elegans
Exon205725   241   V: 13859480-13859720 Caenorhabditis elegans
Exon205726   153   V: 13860067-13860219 Caenorhabditis elegans
Exon205727   164   V: 13860270-13860433 Caenorhabditis elegans
Exon205728   66   V: 13860629-13860694 Caenorhabditis elegans
Exon205729   131   V: 13861015-13861145 Caenorhabditis elegans
Exon205730   208   V: 13861195-13861402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09F3.11.1 13859206 13861402 1

1 Sequence

Length
1103

1 Sequence Ontology Term

Identifier Name Description
transcript