WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B3.2.1 Sequence Name  C06B3.2.1
Length (nt)  2076   Chromosome Location  V: 13899513-13902653
Chromosome . Primary Identifier  V Chromosome Location . Start  13899513
Chromosome Location . End  13902653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007361 oac-3 C06B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B3.2 C06B3.2 2076   V: 13899513-13899599

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B3.2.1 13899513 13902653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205755   87   V: 13899513-13899599 Caenorhabditis elegans
Exon205756   184   V: 13899654-13899837 Caenorhabditis elegans
Exon205757   146   V: 13899882-13900027 Caenorhabditis elegans
Exon205758   197   V: 13900105-13900301 Caenorhabditis elegans
Exon205759   104   V: 13900347-13900450 Caenorhabditis elegans
Exon205760   168   V: 13900519-13900686 Caenorhabditis elegans
Exon205761   125   V: 13900735-13900859 Caenorhabditis elegans
Exon205762   157   V: 13900913-13901069 Caenorhabditis elegans
Exon205763   89   V: 13901119-13901207 Caenorhabditis elegans
Exon205764   191   V: 13901255-13901445 Caenorhabditis elegans
Exon205765   219   V: 13901734-13901952 Caenorhabditis elegans
Exon205766   95   V: 13902004-13902098 Caenorhabditis elegans
Exon205767   146   V: 13902231-13902376 Caenorhabditis elegans
Exon205768   86   V: 13902436-13902521 Caenorhabditis elegans
Exon205769   82   V: 13902572-13902653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B3.2.1 13899513 13902653 1

1 Sequence

Length
2076

1 Sequence Ontology Term

Identifier Name Description
transcript