WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10D12.5.1 Sequence Name  R10D12.5.1
Length (nt)  1036   Chromosome Location  V: 13946969-13948923
Chromosome . Primary Identifier  V Chromosome Location . Start  13946969
Chromosome Location . End  13948923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10D12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011186 clec-226 R10D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10D12.5 R10D12.5 912   V: 13946969-13947181

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10D12.5.1 13946969 13948923 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205880   213   V: 13946969-13947181 Caenorhabditis elegans
Exon205881   124   V: 13947230-13947353 Caenorhabditis elegans
Exon205882   65   V: 13947771-13947835 Caenorhabditis elegans
Exon205883   115   V: 13947876-13947990 Caenorhabditis elegans
Exon205884   131   V: 13948033-13948163 Caenorhabditis elegans
Exon205885   182   V: 13948459-13948640 Caenorhabditis elegans
Exon205886   206   V: 13948718-13948923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10D12.5.1 13946969 13948923 1

1 Sequence

Length
1036

1 Sequence Ontology Term

Identifier Name Description
transcript