WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58E10.1a.1 Sequence Name  F58E10.1a.1
Length (nt)  2762   Chromosome Location  V: 13987164-14002548
Chromosome . Primary Identifier  V Chromosome Location . Start  13987164
Chromosome Location . End  14002548 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58E10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010259 ric-7 F58E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58E10.1a F58E10.1a 2085   V: 13987690-13987878

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58E10.1a.1 13987164 14002548 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206045   715   V: 13987164-13987878 Caenorhabditis elegans
Exon206048   195   V: 13989662-13989856 Caenorhabditis elegans
Exon206052   99   V: 13990782-13990880 Caenorhabditis elegans
Exon206057   156   V: 13995104-13995259 Caenorhabditis elegans
Exon206059   313   V: 13995707-13996019 Caenorhabditis elegans
Exon206061   168   V: 13996985-13997152 Caenorhabditis elegans
Exon206063   134   V: 13997402-13997535 Caenorhabditis elegans
Exon206065   69   V: 13997585-13997653 Caenorhabditis elegans
Exon206067   257   V: 13997700-13997956 Caenorhabditis elegans
Exon206069   136   V: 13998948-13999083 Caenorhabditis elegans
Exon206071   117   V: 13999679-13999795 Caenorhabditis elegans
Exon206073   158   V: 14000703-14000860 Caenorhabditis elegans
Exon206075   245   V: 14002304-14002548 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58E10.1a.1 13987164 14002548 -1

1 Sequence

Length
2762

1 Sequence Ontology Term

Identifier Name Description
transcript