WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58E10.1b.1 Sequence Name  F58E10.1b.1
Length (nt)  2654   Chromosome Location  V: 13987166-14005912
Chromosome . Primary Identifier  V Chromosome Location . Start  13987166
Chromosome Location . End  14005912 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58E10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010259 ric-7 F58E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58E10.1b F58E10.1b 2130   V: 13987690-13987878

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58E10.1b.1 13987166 14005912 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206046   713   V: 13987166-13987878 Caenorhabditis elegans
Exon206049   195   V: 13989662-13989856 Caenorhabditis elegans
Exon206053   99   V: 13990782-13990880 Caenorhabditis elegans
Exon206058   156   V: 13995104-13995259 Caenorhabditis elegans
Exon206060   313   V: 13995707-13996019 Caenorhabditis elegans
Exon206062   168   V: 13996985-13997152 Caenorhabditis elegans
Exon206064   134   V: 13997402-13997535 Caenorhabditis elegans
Exon206066   69   V: 13997585-13997653 Caenorhabditis elegans
Exon206068   257   V: 13997700-13997956 Caenorhabditis elegans
Exon206070   136   V: 13998948-13999083 Caenorhabditis elegans
Exon206072   117   V: 13999679-13999795 Caenorhabditis elegans
Exon206074   158   V: 14000703-14000860 Caenorhabditis elegans
Exon206076   139   V: 14005774-14005912 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58E10.1b.1 13987166 14005912 -1

1 Sequence

Length
2654

1 Sequence Ontology Term

Identifier Name Description
transcript