WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G5.1.1 Sequence Name  T08G5.1.1
Length (nt)  1216   Chromosome Location  V: 14018766-14020388
Chromosome . Primary Identifier  V Chromosome Location . Start  14018766
Chromosome Location . End  14020388 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011622 T08G5.1 T08G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G5.1 T08G5.1 726   V: 14019200-14019242

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G5.1.1 14018766 14020388 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206109   477   V: 14018766-14019242 Caenorhabditis elegans
Exon206110   69   V: 14019287-14019355 Caenorhabditis elegans
Exon206111   424   V: 14019630-14020053 Caenorhabditis elegans
Exon206112   85   V: 14020097-14020181 Caenorhabditis elegans
Exon206113   161   V: 14020228-14020388 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G5.1.1 14018766 14020388 1

1 Sequence

Length
1216

1 Sequence Ontology Term

Identifier Name Description
transcript