WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D1086.4a Sequence Name  D1086.4a
Length (nt)  759   Chromosome Location  V: 14090881-14090926
Chromosome . Primary Identifier  V Chromosome Location . Start  14090881
Chromosome Location . End  14090926
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1086.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09062 HIM-5, isoform a 28.8 252 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00043422
WBRNAi00012552
WBRNAi00030368
WBRNAi00061770
WBRNAi00111473
WBRNAi00111474

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D1086.4a 14090881 14090926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001864 him-5 D1086.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:D1086.4a 14090881 14090926 1
CDS:D1086.4a 14091111 14091209 1
CDS:D1086.4a 14091297 14091427 1
CDS:D1086.4a 14091473 14091701 1
CDS:D1086.4a 14091751 14091843 1
CDS:D1086.4a 14092070 14092161 1
CDS:D1086.4a 14092258 14092326 1

1 Sequence

Length
759

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1086.4a.1 D1086.4a.1 1342   V: 14090426-14092454