WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1j.1 Sequence Name  H39E23.1j.1
Length (nt)  4366   Chromosome Location  V: 14112039-14141119
Chromosome . Primary Identifier  V Chromosome Location . Start  14112039
Chromosome Location . End  14141119 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1j H39E23.1j 3603   V: 14112802-14112915

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1j.1 14112039 14141119 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206349   877   V: 14112039-14112915 Caenorhabditis elegans
Exon206370   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206384   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206410   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206425   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206442   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206466   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206484   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206487   168   V: 14121345-14121512 Caenorhabditis elegans
Exon206514   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206529   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206544   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206562   215   V: 14131640-14131854 Caenorhabditis elegans
Exon206566   102   V: 14132840-14132941 Caenorhabditis elegans
Exon206570   69   V: 14133227-14133295 Caenorhabditis elegans
Exon206577   30   V: 14141090-14141119 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1j.1 14112039 14141119 -1

1 Sequence

Length
4366

1 Sequence Ontology Term

Identifier Name Description
transcript