WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1a.1 Sequence Name  H39E23.1a.1
Length (nt)  4347   Chromosome Location  V: 14112034-14141119
Chromosome . Primary Identifier  V Chromosome Location . Start  14112034
Chromosome Location . End  14141119 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1a H39E23.1a 3579   V: 14112802-14112915

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1a.1 14112034 14141119 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206401   882   V: 14112034-14112915 Caenorhabditis elegans
Exon206414   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206428   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206452   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206468   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206483   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206507   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206525   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206542   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206556   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206571   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206587   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206614   215   V: 14131640-14131854 Caenorhabditis elegans
Exon206619   102   V: 14132840-14132941 Caenorhabditis elegans
Exon206623   69   V: 14133227-14133295 Caenorhabditis elegans
Exon206630   30   V: 14141090-14141119 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1a.1 14112034 14141119 -1

1 Sequence

Length
4347

1 Sequence Ontology Term

Identifier Name Description
transcript