WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1m.1 Sequence Name  H39E23.1m.1
Length (nt)  5149   Chromosome Location  V: 14112046-14145367
Chromosome . Primary Identifier  V Chromosome Location . Start  14112046
Chromosome Location . End  14145367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1m H39E23.1m 3390   V: 14117600-14117770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1m.1 14112046 14145367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206405   870   V: 14112046-14112915 Caenorhabditis elegans
Exon206427   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206441   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206450   69   V: 14114476-14114544 Caenorhabditis elegans
Exon206467   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206482   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206499   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206506   448   V: 14118539-14118986 Caenorhabditis elegans
Exon206523   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206540   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206555   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206570   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206585   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206600   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206617   215   V: 14131640-14131854 Caenorhabditis elegans
Exon206621   102   V: 14132840-14132941 Caenorhabditis elegans
Exon206625   69   V: 14133227-14133295 Caenorhabditis elegans
Exon206632   327   V: 14145041-14145367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1m.1 14112046 14145367 -1

1 Sequence

Length
5149

1 Sequence Ontology Term

Identifier Name Description
transcript