WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1l.1 Sequence Name  H39E23.1l.1
Length (nt)  4091   Chromosome Location  V: 14112299-14128055
Chromosome . Primary Identifier  V Chromosome Location . Start  14112299
Chromosome Location . End  14128055 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1l H39E23.1l 3321   V: 14112802-14112915

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1l.1 14112299 14128055 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206406   617   V: 14112299-14112915 Caenorhabditis elegans
Exon206426   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206440   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206466   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206481   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206498   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206522   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206539   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206554   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206569   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206584   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206599   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206609   425   V: 14127631-14128055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1l.1 14112299 14128055 -1

1 Sequence

Length
4091

1 Sequence Ontology Term

Identifier Name Description
transcript