WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1e.3 Sequence Name  H39E23.1e.3
Length (nt)  3174   Chromosome Location  V: 14113764-14126538
Chromosome . Primary Identifier  V Chromosome Location . Start  14113764
Chromosome Location . End  14126538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1e.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1e H39E23.1e 2901   V: 14117600-14117770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1e.3 14113764 14126538 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206388   51   V: 14113764-14113814 Caenorhabditis elegans
Exon206404   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206435   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206448   448   V: 14118539-14118986 Caenorhabditis elegans
Exon206459   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206477   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206493   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206508   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206523   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206539   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206551   224   V: 14126315-14126538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1e.3 14113764 14126538 -1

1 Sequence

Length
3174

1 Sequence Ontology Term

Identifier Name Description
transcript