WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1e.4 Sequence Name  H39E23.1e.4
Length (nt)  3441   Chromosome Location  V: 14114461-14126538
Chromosome . Primary Identifier  V Chromosome Location . Start  14114461
Chromosome Location . End  14126538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1e.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1e H39E23.1e 2901   V: 14117600-14117770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1e.4 14114461 14126538 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206391   84   V: 14114461-14114544 Caenorhabditis elegans
Exon206405   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206420   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206436   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206449   448   V: 14118539-14118986 Caenorhabditis elegans
Exon206460   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206478   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206494   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206509   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206524   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206540   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206552   224   V: 14126315-14126538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1e.4 14114461 14126538 -1

1 Sequence

Length
3441

1 Sequence Ontology Term

Identifier Name Description
transcript