WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1e.5 Sequence Name  H39E23.1e.5
Length (nt)  3207   Chromosome Location  V: 14114461-14126538
Chromosome . Primary Identifier  V Chromosome Location . Start  14114461
Chromosome Location . End  14126538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1e.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1e H39E23.1e 2901   V: 14117600-14117770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1e.5 14114461 14126538 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206446   84   V: 14114461-14114544 Caenorhabditis elegans
Exon206460   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206491   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206504   448   V: 14118539-14118986 Caenorhabditis elegans
Exon206515   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206533   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206549   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206564   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206579   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206595   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206607   224   V: 14126315-14126538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1e.5 14114461 14126538 -1

1 Sequence

Length
3207

1 Sequence Ontology Term

Identifier Name Description
transcript