WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC376.2a.1 Sequence Name  ZC376.2a.1
Length (nt)  2133   Chromosome Location  V: 14171639-14175355
Chromosome . Primary Identifier  V Chromosome Location . Start  14171639
Chromosome Location . End  14175355 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC376.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013874 cest-2.2 ZC376.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC376.2a ZC376.2a 2013   V: 14171703-14171815

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC376.2a.1 14171639 14175355 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206629   177   V: 14171639-14171815 Caenorhabditis elegans
Exon206631   302   V: 14171860-14172161 Caenorhabditis elegans
Exon206633   315   V: 14172205-14172519 Caenorhabditis elegans
Exon206635   234   V: 14172802-14173035 Caenorhabditis elegans
Exon206637   206   V: 14173082-14173287 Caenorhabditis elegans
Exon206639   177   V: 14173334-14173510 Caenorhabditis elegans
Exon206641   110   V: 14173590-14173699 Caenorhabditis elegans
Exon206644   202   V: 14174336-14174537 Caenorhabditis elegans
Exon206646   88   V: 14174587-14174674 Caenorhabditis elegans
Exon206649   198   V: 14174719-14174916 Caenorhabditis elegans
Exon206653   124   V: 14175232-14175355 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC376.2a.1 14171639 14175355 -1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
transcript