WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:ZC376.2b.1 Sequence Name  ZC376.2b.1
Length (nt)  2103   Chromosome Location  V: 14171647-14175327
Chromosome . Primary Identifier  V Chromosome Location . Start  14171647
Chromosome Location . End  14175327 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC376.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013874 cest-2.2 ZC376.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC376.2b ZC376.2b 2019   V: 14171703-14171815

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC376.2b.1 14171647 14175327 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206630   169   V: 14171647-14171815 Caenorhabditis elegans
Exon206632   302   V: 14171860-14172161 Caenorhabditis elegans
Exon206634   315   V: 14172205-14172519 Caenorhabditis elegans
Exon206636   234   V: 14172802-14173035 Caenorhabditis elegans
Exon206638   206   V: 14173082-14173287 Caenorhabditis elegans
Exon206640   177   V: 14173334-14173510 Caenorhabditis elegans
Exon206642   110   V: 14173590-14173699 Caenorhabditis elegans
Exon206645   202   V: 14174336-14174537 Caenorhabditis elegans
Exon206647   88   V: 14174587-14174674 Caenorhabditis elegans
Exon206651   204   V: 14174719-14174922 Caenorhabditis elegans
Exon206652   96   V: 14175232-14175327 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC376.2b.1 14171647 14175327 -1

1 Sequence

Length
2103

1 Sequence Ontology Term

Identifier Name Description
transcript