WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC376.5.1 Sequence Name  ZC376.5.1
Length (nt)  1780   Chromosome Location  V: 14183124-14185609
Chromosome . Primary Identifier  V Chromosome Location . Start  14183124
Chromosome Location . End  14185609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC376.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006613 trm-1 ZC376.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC376.5 ZC376.5 1581   V: 14183226-14183474

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC376.5.1 14183124 14185609 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206674   351   V: 14183124-14183474 Caenorhabditis elegans
Exon206675   499   V: 14183525-14184023 Caenorhabditis elegans
Exon206677   378   V: 14184490-14184867 Caenorhabditis elegans
Exon206679   306   V: 14184916-14185221 Caenorhabditis elegans
Exon206681   70   V: 14185269-14185338 Caenorhabditis elegans
Exon206683   97   V: 14185391-14185487 Caenorhabditis elegans
Exon206685   79   V: 14185531-14185609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC376.5.1 14183124 14185609 -1

1 Sequence

Length
1780

1 Sequence Ontology Term

Identifier Name Description
transcript