WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC376.6b.1 Sequence Name  ZC376.6b.1
Length (nt)  3787   Chromosome Location  V: 14185691-14192161
Chromosome . Primary Identifier  V Chromosome Location . Start  14185691
Chromosome Location . End  14192161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC376.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013877 ints-2 ZC376.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC376.6b ZC376.6b 3471   V: 14185785-14185829

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC376.6b.1 14185691 14192161 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206741   139   V: 14185691-14185829 Caenorhabditis elegans
Exon206743   81   V: 14185878-14185958 Caenorhabditis elegans
Exon206745   373   V: 14186002-14186374 Caenorhabditis elegans
Exon206747   167   V: 14186636-14186802 Caenorhabditis elegans
Exon206749   105   V: 14186850-14186954 Caenorhabditis elegans
Exon206751   656   V: 14187013-14187668 Caenorhabditis elegans
Exon206753   97   V: 14187716-14187812 Caenorhabditis elegans
Exon206755   194   V: 14188248-14188441 Caenorhabditis elegans
Exon206757   244   V: 14188487-14188730 Caenorhabditis elegans
Exon206759   120   V: 14188778-14188897 Caenorhabditis elegans
Exon206761   99   V: 14189338-14189436 Caenorhabditis elegans
Exon206763   431   V: 14189488-14189918 Caenorhabditis elegans
Exon206765   147   V: 14189975-14190121 Caenorhabditis elegans
Exon206766   134   V: 14190162-14190295 Caenorhabditis elegans
Exon206769   263   V: 14191262-14191524 Caenorhabditis elegans
Exon206771   135   V: 14191570-14191704 Caenorhabditis elegans
Exon206773   402   V: 14191760-14192161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC376.6b.1 14185691 14192161 1

1 Sequence

Length
3787

1 Sequence Ontology Term

Identifier Name Description
transcript