WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A9.3.1 Sequence Name  T16A9.3.1
Length (nt)  1514   Chromosome Location  V: 14205514-14209010
Chromosome . Primary Identifier  V Chromosome Location . Start  14205514
Chromosome Location . End  14209010 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011793 T16A9.3 T16A9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A9.3 T16A9.3 1032   V: 14207598-14207608

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.3.1 14205514 14209010 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206781   275   V: 14205514-14205788 Caenorhabditis elegans
Exon206783   92   V: 14206220-14206311 Caenorhabditis elegans
Exon206785   102   V: 14207507-14207608 Caenorhabditis elegans
Exon206787   420   V: 14207652-14208071 Caenorhabditis elegans
Exon206790   163   V: 14208142-14208304 Caenorhabditis elegans
Exon206793   159   V: 14208432-14208590 Caenorhabditis elegans
Exon206796   138   V: 14208641-14208778 Caenorhabditis elegans
Exon206799   165   V: 14208846-14209010 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.3.1 14205514 14209010 1

1 Sequence

Length
1514

1 Sequence Ontology Term

Identifier Name Description
transcript