WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A9.4b.1 Sequence Name  T16A9.4b.1
Length (nt)  2919   Chromosome Location  V: 14215339-14220709
Chromosome . Primary Identifier  V Chromosome Location . Start  14215339
Chromosome Location . End  14220709 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011794 nep-21 T16A9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A9.4b T16A9.4b 2334   V: 14215681-14215857

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4b.1 14215339 14220709 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206816   519   V: 14215339-14215857 Caenorhabditis elegans
Exon206821   105   V: 14215904-14216008 Caenorhabditis elegans
Exon206825   118   V: 14216366-14216483 Caenorhabditis elegans
Exon206829   199   V: 14216537-14216735 Caenorhabditis elegans
Exon206833   340   V: 14216796-14217135 Caenorhabditis elegans
Exon206837   100   V: 14217192-14217291 Caenorhabditis elegans
Exon206841   94   V: 14217648-14217741 Caenorhabditis elegans
Exon206844   88   V: 14218131-14218218 Caenorhabditis elegans
Exon206849   105   V: 14218471-14218575 Caenorhabditis elegans
Exon206853   404   V: 14218626-14219029 Caenorhabditis elegans
Exon206857   289   V: 14219077-14219365 Caenorhabditis elegans
Exon206861   140   V: 14219824-14219963 Caenorhabditis elegans
Exon206865   131   V: 14220006-14220136 Caenorhabditis elegans
Exon206869   287   V: 14220423-14220709 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4b.1 14215339 14220709 -1

1 Sequence

Length
2919

1 Sequence Ontology Term

Identifier Name Description
transcript