WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E11.1.1 Sequence Name  K02E11.1.1
Length (nt)  2270   Chromosome Location  V: 14232281-14236042
Chromosome . Primary Identifier  V Chromosome Location . Start  14232281
Chromosome Location . End  14236042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010510 ent-3 K02E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E11.1 K02E11.1 2190   V: 14232321-14232650

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E11.1.1 14232281 14236042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206877   370   V: 14232281-14232650 Caenorhabditis elegans
Exon206878   86   V: 14232695-14232780 Caenorhabditis elegans
Exon206879   121   V: 14232910-14233030 Caenorhabditis elegans
Exon206880   194   V: 14233078-14233271 Caenorhabditis elegans
Exon206881   110   V: 14233316-14233425 Caenorhabditis elegans
Exon206882   76   V: 14233502-14233577 Caenorhabditis elegans
Exon206883   95   V: 14233814-14233908 Caenorhabditis elegans
Exon206884   137   V: 14233952-14234088 Caenorhabditis elegans
Exon206885   255   V: 14234135-14234389 Caenorhabditis elegans
Exon206886   159   V: 14234628-14234786 Caenorhabditis elegans
Exon206887   308   V: 14234835-14235142 Caenorhabditis elegans
Exon206888   123   V: 14235185-14235307 Caenorhabditis elegans
Exon206889   49   V: 14235361-14235409 Caenorhabditis elegans
Exon206890   120   V: 14235811-14235930 Caenorhabditis elegans
Exon206891   67   V: 14235976-14236042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E11.1.1 14232281 14236042 -1

1 Sequence

Length
2270

1 Sequence Ontology Term

Identifier Name Description
transcript