WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E11.1.1 Sequence Name  K02E11.1.1
Length (nt)  2270   Chromosome Location  V: 14232281-14236042
Chromosome . Primary Identifier  V Chromosome Location . Start  14232281
Chromosome Location . End  14236042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010510 ent-3 K02E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E11.1 K02E11.1 2190   V: 14232321-14232650

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E11.1.1 14232281 14236042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206931   370   V: 14232281-14232650 Caenorhabditis elegans
Exon206932   86   V: 14232695-14232780 Caenorhabditis elegans
Exon206933   121   V: 14232910-14233030 Caenorhabditis elegans
Exon206934   194   V: 14233078-14233271 Caenorhabditis elegans
Exon206935   110   V: 14233316-14233425 Caenorhabditis elegans
Exon206936   76   V: 14233502-14233577 Caenorhabditis elegans
Exon206937   95   V: 14233814-14233908 Caenorhabditis elegans
Exon206938   137   V: 14233952-14234088 Caenorhabditis elegans
Exon206939   255   V: 14234135-14234389 Caenorhabditis elegans
Exon206940   159   V: 14234628-14234786 Caenorhabditis elegans
Exon206941   308   V: 14234835-14235142 Caenorhabditis elegans
Exon206942   123   V: 14235185-14235307 Caenorhabditis elegans
Exon206943   49   V: 14235361-14235409 Caenorhabditis elegans
Exon206944   120   V: 14235811-14235930 Caenorhabditis elegans
Exon206945   67   V: 14235976-14236042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E11.1.1 14232281 14236042 -1

1 Sequence

Length
2270

1 Sequence Ontology Term

Identifier Name Description
transcript