WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02D5.6a.1 Sequence Name  R02D5.6a.1
Length (nt)  1008   Chromosome Location  V: 14511706-14518086
Chromosome . Primary Identifier  V Chromosome Location . Start  14511706
Chromosome Location . End  14518086 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02D5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010979 R02D5.6 R02D5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02D5.6a R02D5.6a 1008   V: 14511706-14511793

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02D5.6a.1 14511706 14518086 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207464   88   V: 14511706-14511793 Caenorhabditis elegans
Exon207465   257   V: 14512507-14512763 Caenorhabditis elegans
Exon207470   94   V: 14512808-14512901 Caenorhabditis elegans
Exon207475   98   V: 14513490-14513587 Caenorhabditis elegans
Exon207480   168   V: 14513633-14513800 Caenorhabditis elegans
Exon207485   95   V: 14513847-14513941 Caenorhabditis elegans
Exon207490   114   V: 14513994-14514107 Caenorhabditis elegans
Exon207496   78   V: 14514212-14514289 Caenorhabditis elegans
Exon207501   16   V: 14518071-14518086 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02D5.6a.1 14511706 14518086 -1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
transcript