WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53A5.5b.1 Sequence Name  C53A5.5b.1
Length (nt)  1293   Chromosome Location  V: 14540298-14542893
Chromosome . Primary Identifier  V Chromosome Location . Start  14540298
Chromosome Location . End  14542893 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53A5.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008265 kcnl-4 C53A5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53A5.5b C53A5.5b 1293   V: 14540298-14540561

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53A5.5b.1 14540298 14542893 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207546   264   V: 14540298-14540561 Caenorhabditis elegans
Exon207548   109   V: 14540627-14540735 Caenorhabditis elegans
Exon207550   313   V: 14540780-14541092 Caenorhabditis elegans
Exon207552   64   V: 14541498-14541561 Caenorhabditis elegans
Exon207554   81   V: 14542144-14542224 Caenorhabditis elegans
Exon207556   110   V: 14542332-14542441 Caenorhabditis elegans
Exon207558   141   V: 14542491-14542631 Caenorhabditis elegans
Exon207559   211   V: 14542683-14542893 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53A5.5b.1 14540298 14542893 1

1 Sequence

Length
1293

1 Sequence Ontology Term

Identifier Name Description
transcript