WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53A5.13a.1 Sequence Name  C53A5.13a.1
Length (nt)  2519   Chromosome Location  V: 14546869-14554856
Chromosome . Primary Identifier  V Chromosome Location . Start  14546869
Chromosome Location . End  14554856 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53A5.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008270 C53A5.13 C53A5.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53A5.13a C53A5.13a 2046   V: 14546941-14546992

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53A5.13a.1 14546869 14554856 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207585   124   V: 14546869-14546992 Caenorhabditis elegans
Exon207586   147   V: 14547039-14547185 Caenorhabditis elegans
Exon207588   119   V: 14547283-14547401 Caenorhabditis elegans
Exon207590   52   V: 14547725-14547776 Caenorhabditis elegans
Exon207592   128   V: 14549458-14549585 Caenorhabditis elegans
Exon207594   285   V: 14549629-14549913 Caenorhabditis elegans
Exon207596   228   V: 14549960-14550187 Caenorhabditis elegans
Exon207598   105   V: 14551222-14551326 Caenorhabditis elegans
Exon207600   332   V: 14552437-14552768 Caenorhabditis elegans
Exon207602   156   V: 14553125-14553280 Caenorhabditis elegans
Exon207604   287   V: 14553971-14554257 Caenorhabditis elegans
Exon207607   556   V: 14554301-14554856 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53A5.13a.1 14546869 14554856 1

1 Sequence

Length
2519

1 Sequence Ontology Term

Identifier Name Description
transcript