WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40H4A.2.1 Sequence Name  Y40H4A.2.1
Length (nt)  1055   Chromosome Location  V: 14583302-14585451
Chromosome . Primary Identifier  V Chromosome Location . Start  14583302
Chromosome Location . End  14585451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40H4A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012741 Y40H4A.2 Y40H4A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40H4A.2 Y40H4A.2 1002   V: 14583340-14583393

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40H4A.2.1 14583302 14585451 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207668   92   V: 14583302-14583393 Caenorhabditis elegans
Exon207669   114   V: 14583577-14583690 Caenorhabditis elegans
Exon207670   123   V: 14583812-14583934 Caenorhabditis elegans
Exon207671   75   V: 14583982-14584056 Caenorhabditis elegans
Exon207672   340   V: 14584099-14584438 Caenorhabditis elegans
Exon207673   311   V: 14585141-14585451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40H4A.2.1 14583302 14585451 -1

1 Sequence

Length
1055

1 Sequence Ontology Term

Identifier Name Description
transcript